1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GAAAGTGCTGAGAGAGGTGGCATCTGGAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatcatctttctgtattgtctttctttctccatgattctatgcattagcctttgacatgtcaatcaacagccatcattattggttgtcaagtaa...
species | Zea mays |
transcript | GRMZM2G044011_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAATEST: gi|19272449|gb|BM888705.1|BM888705
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAATEST: gi|19351610|gb|BM896142.1|BM896142
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAATEST: gi|19351009|gb|BM895541.1|BM895541
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAATEST: gi|89251335|gb|DY623121.1|DY623121
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAATEST: gi|22491504|gb|BU051427.1|BU051427
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
EST: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAG TCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
genomic: GAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatc ... tctaatgtagTCTGTAGACTATGACAAGGAGGGATCTGTTTTACGTGTGCGTGGAAAAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGTGCTGAGAGAGGTGGCATCTGGAGGACGTGATGCCGAGCGTGTGAAGCTTAAGTTAGAAATTGTAGTCGAGgtgacgcatcatctttctgtattgtctttctttctccatgattctatgcattagcctttgacatgtcaatcaacagccatcattattggttgtcaagtaa
- - - - - - - - - - - - - - - - - - - - - - - TGAAGC