1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGCTTGATCTGGTAGAGCAATCGTCATTGAAGTACAAGGATGCAGACTTTATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcaccttgttctttggttgaacaagcatctccatttcattcttgcttaaacactgatggcagatttcatgtgtcacag
species | Zea mays |
transcript | GRMZM2G033805_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGG GAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCATEST: gi|71427623|gb|DR808673.1|DR808673
genomic: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcacctt ... tgtgtcacagGAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
EST: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGG GAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCATEST: gi|7227675|gb|AW566316.1|AW566316
genomic: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcacctt ... tgtgtcacagGAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
EST: CTCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGG GAAGGACTATTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCATEST: gi|211383964|gb|FL013556.1|FL013556
genomic: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcacctt ... tgtgtcacagGAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
EST: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGG GAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCATEST: gi|32866155|gb|CF005837.1|CF005837
genomic: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcacctt ... tgtgtcacagGAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
EST: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGG GAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
genomic: ATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcacctt ... tgtgtcacagGAAGGACTACTATCAAGAAGGTAACCATGTGTATAATGAGCTGAATGTCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGCTTGATCTGGTAGAGCAATCGTCATTGAAGTACAAGGATGCAGACTTTATCATTTTCAATACGGGGCATTGGTGGACACATGAGAAAACTGCTCTTGGgtatcaccttgttctttggttgaacaagcatctccatttcattcttgcttaaacactgatggcagatttcatgtgtcacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA