1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
TAGTGTCCGTGCTGTCATAAGAGCTAACAAAAAGAGCTACAGCCTTGTCCAGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagctccttttatgctctgcatcttcatttaagattgcccattcagtgacatttataggttttcgtatcattgttctcttagcttcccttttcc...
species | Zea mays |
transcript | GRMZM2G460078_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|91049611|gb|EB160029.1|EB160029
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|211025828|gb|FK982703.1|FK982703
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|211025826|gb|FK982701.1|FK982701
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|211025831|gb|FK982706.1|FK982706
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|71434528|gb|DR815578.1|DR815578
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|71332183|gb|DR803010.1|DR803010
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|211025829|gb|FK982704.1|FK982704
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGEST: gi|93012882|gb|EB638402.1|EB638402
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAG
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|148961982|gb|EE012780.2|EE012780
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|211025830|gb|FK982705.1|FK982705
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTRTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACAEST: gi|76925597|gb|DV170498.1|DV170498
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
EST: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAAT ATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
genomic: AGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagc ... gtatttttagATGACACCAAATGGGATGCAAGATTCTTCTTCCAAAGGAAGAAATGGAACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGTGTCCGTGCTGTCATAAGAGCTAACAAAAAGAGCTACAGCCTTGTCCAGCTCATTGCAGCCTCTTTTGATGTCTACAACATTTTGTGCAGCAAAAATgtacggcagctccttttatgctctgcatcttcatttaagattgcccattcagtgacatttataggttttcgtatcattgttctcttagcttcccttttcc
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