Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|4680998|gb|AI629668.1|AI629668EST: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAG GTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
genomic: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAGgtactccctc ... tcctgagcagGTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
EST:
gi|113820685|gb|DW944259.1|DW944259EST: CAAGGAGCGTCAAAG GTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
genomic: CAAGGAGCGTCAAAGgtactccctc ... tcctgagcagGTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
EST:
gi|5607844|gb|AI901511.1|AI901511EST: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAG GTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCCCTCGTAGAA
genomic: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAGgtactccctc ... tcctgagcagGTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
EST:
gi|50338979|gb|CO534105.1|CO534105EST: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAG GTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
genomic: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAGgtactccctc ... tcctgagcagGTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
EST:
gi|89249156|gb|DY620942.1|DY620942EST: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAG GTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
genomic: TGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAGgtactccctc ... tcctgagcagGTTAACATGTCGCTGATAGTCCATGATAGCGATGCAAAGGCACTCGTAGAA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACGGGACGTGTGCTGAGGAAAAGTGGGGTTAATGTTCAGATGATCTCGCAAGGAGCGTCAAAGgtactccctcgcttgccagagtcaccatagcacaccaaatgagtactacgtgcttgttggcttgttgcatccatggttcttagtcacaagtcacaacatctatcatcaaaggaaaccaaattgagcaaaatttgtttgtcatatgcatgtttccggcaccgacatttaccacgccttcatcctgagcag
- - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - AAGGAG