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ACCTACCAATTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaacttcatcaattgttgtcatgtaactaaatatttctttctgcattatgtttttatcattgttgttttcagtttgacatgttggcactagagt...
species | Zea mays |
transcript | GRMZM2G163713_T01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|78075306|gb|DV503740.1|DV503740
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|101389847|gb|EB816854.1|EB816854
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTT-AGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|211084459|gb|FL146410.1|FL146410
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTAEST: gi|149085197|gb|EE174704.2|EE174704
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTA
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|149069618|gb|EE158000.2|EE158000
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|148940057|gb|EC884801.2|EC884801
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|78118872|gb|DV537256.1|DV537256
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAA AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|71442758|gb|DR823808.1|DR823808
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAGEST: gi|91048771|gb|EB159189.1|EB159189
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
EST: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAG AAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
genomic: TTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaac ... tcacttgcagAAACAAGAGGAATTGGTTTATGTGACTACCTATGACATTCTCTTTGGTCAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTACCAATTCTTAAAGAGGTTTTAGCATCGAGTGAAATACTGAGCAGCAAATGGAAGgtgagccaacttcatcaattgttgtcatgtaactaaatatttctttctgcattatgtttttatcattgttgttttcagtttgacatgttggcactagagt
- - - - - - - AAGAGG
- - - - - - - - - - - - - - - - - - - - - GAGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG