1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGAGGCGCTCAGGAAATCGGTCGTCTACTTCCGGGAACAGCCCGTCGGCACCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAGgtaaattattgaatgcgaatcgggcttcactgaacatcaaatttgtggaaacagaggaacctttttgtttgttctgtttatgaacgctggaatattagtg...
species | Zea mays |
transcript | GRMZM2G115451_T02 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAG GTTTTTGTGAGGGATTTCGTTCCGAGCGCATTGGCTTTTCTAATGAACAATEST: gi|78087480|gb|DV515873.1|DV515873
genomic: CCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAGgtaaattatt ... attatttcagGTTTTTGTGAGGGATTTCGTTCCGAGCGCATTGGCTTTTCTAATGAACAAT
EST: CCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAG GTTTTTGTGAGGGATTTCGTTCCGAGCGCATTGGCTTTTCTAATGAACAAT
genomic: CCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAGgtaaattatt ... attatttcagGTTTTTGTGAGGGATTTCGTTCCGAGCGCATTGGCTTTTCTAATGAACAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGCGCTCAGGAAATCGGTCGTCTACTTCCGGGAACAGCCCGTCGGCACCATTGCTGCCGTCGATCATGCGTCGGAGGAAGTGCTCAACTATGATCAGgtaaattattgaatgcgaatcgggcttcactgaacatcaaatttgtggaaacagaggaacctttttgtttgttctgtttatgaacgctggaatattagtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaacagag