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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCTTTTACTGGGATTTCGCCCCCTCCTGTGTCTGAAGCTGGTGTTGTAACTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCAAGgtaacatatcgtagctttcagatacattgttgcttctgttaataaaattgatcttttttcaccatccagtgtctatatctgtgaaatatgataataagtt...

Basic information

species Zea mays
transcript GRMZM2G092244_T03
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|78080314|gb|DV508726.1|DV508726
EST:     CTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCCAAG                         G-CCCAAGCTTTTGCTGAT
genomic: CTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCC-AAGgtaacatatc ... ctcgttgtagGGCCCAAGCTTTTGCTGAT
EST: gi|76287506|gb|DV027074.1|DV027074
EST:     ACTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCAAG                         GGCCCAAGCTTTTGCTGATCACTTCAAGATGGCGCTGGACTGCTTCTTCGC
genomic: ACTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCAAGgtaacatatc ... ctcgttgtagGGCCCAAGCTTTTGCTGATCACTTCAAGATGGCGCTGGACTGCTTCTTCGC
EST: gi|74235718|gb|DT643632.1|DT643632
EST:     ACTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCAAG                         GGCCCTAGCTTTTGCTGATCACTTCAAGATGGCGCTGGACTG
genomic: ACTGTATCAAATGGAGTCTTGAGAAACAATGTGGTTATCACAAATCCAAGgtaacatatc ... ctcgttgtagGGCCCAAGCTTTTGCTGATCACTTCAAGATGGCGCTGGACTG