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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac...

Basic information

species Zea mays
transcript GRMZM2G028883_T01
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os04g43540.1 (Oryza sativa), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac--------
||||||||||||||||||||||||||| |||||||| || |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||| | |   || |    | || | || || ||  |   || | ||| |  ||||| |||| ||||   |    ||    |     || || |   |        
GTTCAAGAGGTTCGTGGAGATCGGGCGGGTGGCCCTGGTGAACTACGGCAAGGACTACGGCCGCCTCGTCGTCATTGTCGATGTCGTCGACCAGAACAGGgtgagttaga---tctgtctccctcaccctggttgttgc---tgatacgcctgtgctgatgtgtggatatgagttcagttcctg--agttactcttgggctgcatagt

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA20G35000.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaat-gtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac-------------
 |||||||||| ||| ||||||||| | || ||||   | |||||||||||||| |||||| | ||||||||||| ||||||||| | ||||||||||| || | ||   |    ||    | ||||  | | |  || | |||    | |      |    ||||      |   | ||  | |||  ||  | |||| |             
TTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCCCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATTGTCGACGTCATTGACCAGAACAGAgtaactccccaccaccacccaagttcttacctttattcacattta-cgcacacccatttgcatgttttcttagaattagttcttgctttgt--tgataatcctaataatattag

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA10G32580.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctttagctg-aggtgttgataccggc--ctggtgttggctgcgtat--tcataaac-
 |||||||||| ||| ||||||||| | || || |   | |||||||||||||| |||||| | ||||||||||||||||||||| | ||||||||||| || |  |       ||    | ||||  | | || || | |||          |  || | || ||  ||   |    || | || | ||   ||  | ||||   
TTTCAAGAGGTACGTTGAGATCGGGAGGGTTGCTCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATCGTCGACGTCATTGACCAGAACAGAgt-aacccctccaccacccaatttcttacctttgatcacatttaagcatacccatttgcatgttttcttagaagtagttgttttttgttgttgatgataataatag

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA16G08910.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaa--aatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac-------------
       ||||  ||  ||||| || | || ||||   | |||||||||||||| ||||||   ||||||||||| ||||||||| | ||||| ||||| || | ||    |    ||    | ||||  | | |  || | |||    | | |    |    || |      |   | ||  | |||  ||  | |||| |             
-------AGGTATGTTCAGATCAGGAGGGTTGCCCAAATCAACTACGGCAAGGAATATGGCATGCTCGTCGTCATTGTCGACGTCATTGACCATAACAGAgtaactcccccaccaccacccaagttcttacctttattcacattta-cacacatccatttgcatgctttcttagaattagttcttgctttgt--tgataatcctaataatattag

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA03G06380.1 (Glycine max), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaa--aatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac-------------
 ||||||||||  || ||||| ||| | ||  |||   | |||||||||||||| |||||| | ||||||||||| ||||| ||| | ||||||||||| || | ||    |    ||    | ||||  | | |  || | |||    | |      |    || |      |   | ||  | |||  ||  | |||| |             
TTTCAAGAGGTATGTTGAGATTGGGAGGGTTTCCCAAATCAACTACGGCAAGGAATATGGCAGGCTCGTCGTCATTGTCGATGTCATTGACCAGAACAGAgtaactctcccaccaccacccaagttcttacctttattcacattta-cacacaaccatttgcatgctttcttagaattagttcttgctttgt--tgataatcctaataatattag

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: AT2G20450.1 (Arabidopsis thaliana), 5'ss of exon 2
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggt--tcgctttagctgaggtgttgataccggcctggtgttggctgcgtattcataaac
 || ||||| ||||||||||| ||| ||||||| || || ||||||||| |||| |||||    ||||| || |||||||| || |||||||| |||||||| | |  | |||  || ||  || | | ||  | | |  | | ||  ||  | || ||    | ||  | |   |   |   |   |    || ||  |  
TTTTAAGAGATTCGTGGAGATTGGGAGAGTGGCGCTCGTTAACTACGGCGAGGATTATGGAAAGCTCGTGGTTATCGTCGATGTAGTCGACCAAAACAGGgtaacttgatatgcaagctctgttttttttttcgatttggtattgtaatcaatgtaactatcttcttattgctcact--gaaatatatattgatacaatagt

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv05s0049g01310.t01 (Vitis vinifera), 5'ss of exon 3
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctt--tagctgaggtgttga-taccggcctggtgtt-ggctgcgtattcataaac-----
 |||||| ||| ||||||| |||||||||| || || || |||||||| || || || ||| | ||||||||||| ||||||||| | || |||||  ||||  ||      ||    |  ||| |   || |  |  |  || ||| | ||  | |   || || ||| || |||     | |  || |   | ||            
TTTCAAGCGGTACGTGGAGGTCGGGCGAGTCGCTCTCGTCAACTACGGAAAAGACTACGGCAGGCTCGTCGTCATAGTCGACGTCATTGATCAGAATCGGgtatgt------gtt---tttctttttcattttatttgctctttgtttggttgctgggaaagttggtgagtatcggagaaatctaagggtttatgttttctgttgtttc

upper sequence: GRMZM2G028883_T01 (Zea mays), 5'ss of exon 2
lower sequence: Vv11s0118g00670.t01 (Vitis vinifera), 5'ss of exon 3
GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaaatgtcagatcacttctctcttgtggtctcctttggttcgctttagctgaggtgttgataccggcc--tggtgttggctgcgtattcataaac--
 |||||| ||| |||||||||||||||||| || || || ||||||||||| || || ||| | ||||||||||| ||||| ||| | || |||||  ||||  ||   |||||  |    |||   | |  |  ||||  ||| ||   | ||   |   | |    | ||     ||||  |||    | |  | | ||   
TTTCAAGCGGTACGTGGAGATCGGGCGAGTCGCTCTCGTCAACTACGGCAAAGAATACGGCAGGCTCGTCGTCATAGTCGATGTCATTGATCAGAATCGGgtatgtgtgaatgtgtgtgtgcttgatt-tcatcctctcggttgttt---tctaagagttatctcagcaacgagtagtggttctggaacggaaaaccttaattt

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211057735|gb|FL416995.1|FL416995
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211284367|gb|FL403208.1|FL403208
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211126538|gb|FL407328.1|FL407328
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211050747|gb|FL374478.1|FL374478
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211221848|gb|FL407464.1|FL407464
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|18180815|gb|BM382025.1|BM382025
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|5607945|gb|AI901612.1|AI901612
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211313239|gb|FL392901.1|FL392901
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211165947|gb|FL375003.1|FL375003
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|29946618|gb|CB816240.1|CB816240
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211494460|gb|FL428226.1|FL428226
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|88748517|gb|DY532658.1|DY532658
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211360514|gb|FL385267.1|FL385267
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTSSA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211143214|gb|FL408633.1|FL408633
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|4753346|gb|AI657251.1|AI657251
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211439750|gb|FL418522.1|FL418522
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTSSA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211026841|gb|FL370336.1|FL370336
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACNAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211150585|gb|FL418274.1|FL418274
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTACCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211428796|gb|FL392518.1|FL392518
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211434204|gb|FL402849.1|FL402849
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211493633|gb|FL397220.1|FL397220
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTACCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211209573|gb|FL394638.1|FL394638
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211323108|gb|FL368450.1|FL368450
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211479851|gb|FL422852.1|FL422852
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211209617|gb|FL397452.1|FL397452
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211131969|gb|FL389091.1|FL389091
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211057286|gb|FL401201.1|FL401201
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211471273|gb|FL385453.1|FL385453
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|37386068|gb|CF630207.1|CF630207
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTCGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|87152982|gb|DY397771.1|DY397771
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|9733117|gb|BE511869.1|BE511869
EST:     TCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: TCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|9952872|gb|BE639455.1|BE639455
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211397824|gb|FL389336.1|FL389336
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCG-MCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211429166|gb|FL408885.1|FL408885
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211369531|gb|FL423738.1|FL423738
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211249692|gb|FL397010.1|FL397010
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|60345598|gb|DN212571.1|DN212571
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211499585|gb|FL402049.1|FL402049
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|9952871|gb|BE639454.1|BE639454
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211292336|gb|FL387401.1|FL387401
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|71304846|gb|DR788536.1|DR788536
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211126324|gb|FL371825.1|FL371825
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|29945582|gb|CB815713.1|CB815713
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211299168|gb|FL411036.1|FL411036
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|14243478|gb|BG841143.2|BG841143
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAAAACAGG                         GCTTTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211314987|gb|FL374729.1|FL374729
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211199119|gb|FL383383.1|FL383383
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|32911085|gb|CF015897.1|CF015897
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTCGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211106642|gb|FL406859.1|FL406859
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211212939|gb|FL424469.1|FL424469
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTCGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211364207|gb|FL423702.1|FL423702
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211516414|gb|FL409528.1|FL409528
EST:     GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
genomic: GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAG-AACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
EST: gi|15215168|gb|BI431186.1|BI431186
EST:     GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
genomic: GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAG-AACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
EST: gi|211194737|gb|FL410101.1|FL410101
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|8102651|gb|AW927299.1|AW927299
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTGGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211199115|gb|FL383379.1|FL383379
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211363431|gb|FL397066.1|FL397066
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTACCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|32164912|gb|CD670230.1|CD670230
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|60345487|gb|DN212460.1|DN212460
EST:     CGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: CGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211341885|gb|FL422753.1|FL422753
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211524495|gb|FL408985.1|FL408985
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211485156|gb|FL401976.1|FL401976
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211217095|gb|FL383478.1|FL383478
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACAAGAACAGG                         GCTMTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211330632|gb|FL423266.1|FL423266
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|19436589|gb|BM952999.1|BM952999
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211325363|gb|FL370100.1|FL370100
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211219621|gb|FL402180.1|FL402180
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|60339771|gb|DN206744.1|DN206744
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|20300679|gb|BQ163622.1|BQ163622
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|67011948|gb|CO440697.1|CO440697
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211153455|gb|FL403820.1|FL403820
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211257174|gb|FL417863.1|FL417863
EST:     GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGT-SA-CANGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
genomic: GGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCA-GAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCG
EST: gi|211137666|gb|FL400355.1|FL400355
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211162916|gb|FL392798.1|FL392798
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCSA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211163059|gb|FL403919.1|FL403919
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTSSA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211123282|gb|FL408216.1|FL408216
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTSSA-CAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|31997790|gb|CD661772.1|CD661772
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|31997792|gb|CD661773.1|CD661773
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211518868|gb|FL413409.1|FL413409
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTSSACAAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211478910|gb|FL382320.1|FL382320
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|211060388|gb|FL405184.1|FL405184
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|32164911|gb|CD670229.1|CD670229
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|22490936|gb|BU050859.1|BU050859
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
EST: gi|83278782|gb|DV942790.1|DV942790
EST:     AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGG                         GCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG
genomic: AGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 515

GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGGCTTTCCCTGACTGACATCAAGATTGACATTAAACGTGTCCCAAAGAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 259

GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGGCTTTCCCTGACTGACATCAAGATTGACATTAAACGTGTCCCAAAGAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 178

GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGGCTTTCCCTGACTGACATCAAGATTGACATTAAACGTGTCCCAAAGAAGA


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 237

GTTCAAGAGGTTCGTGGAGATCGGGCGAGTGGCCCTTGTAAACTACGGCAAGGAGTATGGCCGCCTCGTCGTCATCGTCGACGTCGTCGACCAGAACAGGgtgagtcaaa ... ctggtattagGCTCTTGTTGATGCCCCCGACATGGTTCGTTGCCAAATGAACTTCAAGCGGCTTTCCCTGACTGACATCAAGATTGACATTAAACGTGTCCCAAAGAAGA