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GATGAGATTGAGAGGAAGGTTGCCAGCCATCGAAGACGTCTCCAGTCAGAATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaagaaggcagggaaagatacccgcttatttgacagtatcatttctgttgtatttgaacttgcagcatcattgacttccacaactccatatatta...
species | Zea mays |
transcript | GRMZM2G174785_T01 |
intron # | 17 |
splice site | 5' |
intron type | U2 |
EST: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTG AAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATGEST: gi|211086883|gb|FL470604.1|FL470604
genomic: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaaga ... tattttgcagAAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATG
EST: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTG AAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATGEST: gi|32942848|gb|CF047667.1|CF047667
genomic: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaaga ... tattttgcagAAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATG
EST: TTATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTG AAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCCACATEST: gi|211082046|gb|FL278033.1|FL278033
genomic: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaaga ... tattttgcagAAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATG-CACAT
EST: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTG AAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATGEST: gi|60401267|gb|DN234074.1|DN234074
genomic: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaaga ... tattttgcagAAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATG
EST: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTG AAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATG
genomic: ATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaaga ... tattttgcagAAAGAACATCATCGTCGTCGGAGCGGAAAGAGAGGCATGGCGATGCACATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGAGATTGAGAGGAAGGTTGCCAGCCATCGAAGACGTCTCCAGTCAGAATATGGTTTATCCACTCCAACTGATGGTGCTAACAGCAGGCGATCTTCTGgtatgtaagaaggcagggaaagatacccgcttatttgacagtatcatttctgttgtatttgaacttgcagcatcattgacttccacaactccatatatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaagata