1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' | 19 5' 3' | 20 5' 3' |
GTTGTCGTTCATAGCATAAGACTTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaaattgtctcagtttactcagttacttagtttctcctcaattttaattgaatttgaatatgatgtgtctgctagtttgctgcataatgaccatacctatttactgcagtatccttttttatttaggttgaagcatgtctataattctcattttaatgctcaacag
species | Zea mays |
transcript | GRMZM2G303655_T01 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAG GTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|31354456|gb|CD438813.1|CD438813
genomic: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaa ... tgctcaacagGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAG GTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|32916706|gb|CF021518.1|CF021518
genomic: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaa ... tgctcaacagGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAG GTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|47962024|gb|CN844733.1|CN844733
genomic: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaa ... tgctcaacagGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: GCACCATCAGTGATGTGATTACTGATTTGAAAACCAAG GTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTACEST: gi|60359281|gb|DN226254.1|DN226254
genomic: GCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaa ... tgctcaacagGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
EST: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAG GTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
genomic: TTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaa ... tgctcaacagGTTGAACTATCTAATCCTGACGCTGAGCTCCGCTTGCTTGAAGTATTTTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTGTCGTTCATAGCATAAGACTTCCAAGAAATAGCACCATCAGTGATGTGATTACTGATTTGAAAACCAAGgtgatcacaaattgtctcagtttactcagttacttagtttctcctcaattttaattgaatttgaatatgatgtgtctgctagtttgctgcataatgaccatacctatttactgcagtatccttttttatttaggttgaagcatgtctataattctcattttaatgctcaacag
- - - - - - - - - - - - - AAGAAA