1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GAAACTTAAAGATGCACCAGTCATTGGTGCCTTTAATCCTGTGAAGGGAGAGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgcatgtgtacggttactaaatgtttatgatgaaatcaactaatctttatgggccatagtcaatagttgaattgtgtcttgcactcttgctagc...
species | Zea mays |
transcript | GRMZM2G136296_T02 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATG ATTGTAAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTAEST: gi|67011396|gb|CO440145.1|CO440145
genomic: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgca ... gtttgttcagATTGTTAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTA
EST: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATG ATTGTTAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTAEST: gi|67040223|gb|CO466478.1|CO466478
genomic: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgca ... gtttgttcagATTGTTAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTA
EST: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATG ATTGNTAATGGACCTCGCEST: gi|211486828|gb|FL010663.1|FL010663
genomic: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgca ... gtttgttcagATTGTTAATGGACCTCGC
EST: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATG ATTGTTAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTA
genomic: AGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgca ... gtttgttcagATTGTTAATGGACCTCGCTCTGTAGAATCTCTAAACGACAAGTTTGAAGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAACTTAAAGATGCACCAGTCATTGGTGCCTTTAATCCTGTGAAGGGAGAGATAGTCCTCTCACAATTTAGCCTTGACAACTCCTGGAACAGAGCTATGgtatgtcgcatgtgtacggttactaaatgtttatgatgaaatcaactaatctttatgggccatagtcaatagttgaattgtgtcttgcactcttgctagc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT