1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAGgtaggacgccttgctataacgctattgatgcatttgacgctgaacattcttttgatttgcctgcctggtgtgcgacatcatgtatatgtgtgtgtgtatgtgttactgtgttggcag
species | Zea mays |
transcript | GRMZM5G804772_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: CCCCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAGEST: gi|76910497|gb|DV163897.1|DV163897
genomic: -CTCAAGAAAAAGGGGCTTTTCCAGgtaggacgcc ... gtgttggcagG
EST: CCCCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAGEST: gi|60347885|gb|DN214858.1|DN214858
genomic: CTTCAAGAAAAAGGGGCTTTTCCAGgtaggacgcc ... gtgttggcagG
EST: CCCCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAGEST: gi|89761247|gb|DY689341.1|DY689341
genomic: -CTCAAGAAAAAGGGGCTTTTCCAGgtaggacgcc ... gtgttggcagG
EST: CCCCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAG
genomic: CTTCAAGAAAAAGGGGCTTTTCCAGgtaggacgcc ... gtgttggcagG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAAACGACAAGAATTTTTCAAGAAAAAGGGGCTTTTCCAGgtaggacgccttgctataacgctattgatgcatttgacgctgaacattcttttgatttgcctgcctggtgtgcgacatcatgtatatgtgtgtgtgtatgtgttactgtgttggcag
- - - - - - - - - - AAGAAA