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TCAATTTGGAGGATATACTCTAGTAAGGAACTCCAAAGATCTATTTCAAAGTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgcatatagtctgtaacgggcatcatcattttgttttgtcctttctcaagatttttggtactgactaccaaattctatttgagatgaattctc...
species | Zea mays |
transcript | GRMZM2G702159_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAG CACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTCEST: gi|91875691|gb|EB405648.1|EB405648
genomic: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgc ... ttgattgcagCACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTC
EST: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAG CACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTCEST: gi|33285753|gb|CF075548.1|CF075548
genomic: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgc ... ttgattgcagCACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTC
EST: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAG CACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTCEST: gi|211458173|gb|FL467225.1|FL467225
genomic: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgc ... ttgattgcagCACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTC
EST: GCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAG CACACCAGAATACCCATCCCAACACTTTCTGAGCTTTTGCCTGAACCTTGTEST: gi|33770597|gb|CF272891.1|CF272891
genomic: GCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgc ... ttgattgcagCACACCAGAATACCCAT-CCAACACCTTCTGAGCTTTTGCCTGAACCTTGT
EST: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAG CACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTC
genomic: GTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgc ... ttgattgcagCACACCAGAATACCCATCCAACACCTTCTGAGCTTTTGCCTGAACCTTGTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAATTTGGAGGATATACTCTAGTAAGGAACTCCAAAGATCTATTTCAAAGTTTTGGCTTCGAGGATCAGCCAATAATAACTGGACTGATCATTTTCCAGgtatgtctgcatatagtctgtaacgggcatcatcattttgttttgtcctttctcaagatttttggtactgactaccaaattctatttgagatgaattctc
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