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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGCAAGGGCTAGTGAGCTTATTAAAGCTTTAGATGGACAGGATTGTCCCCGTCCAATCTCTTGTTGTCTATTTGCAAACAAGgtagacactttatatttgttataaccttttcattaaattagtagcatagccagtgttctgtgttgtggaatatcacagaaatgtgcaatttatttttgta...

Basic information

species Zea mays
transcript GRMZM2G417217_T02
intron # 12
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G417217_T03 (Zea mays), 5'ss of exon 10
lower sequence: LOC_Os02g38250.1 (Oryza sativa), 5'ss of exon 10
AGCAAGGGCTAGTGAGCTTATTAAAGCTTTAGATGGACAGGATTGTCCCCGTCCAATCTCTTGTTGTCTATTTGCAAACAAGgtagacactttatatttgttataacct-tttcattaaattagtagcatagccagtgt-tctgtgttgtggaatatcacagaaatgtgcaatttatttttgta---
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AGCAAGGGCTGGTGAGCTTATTAAAGCTTTGGATGGACAGGATTGCCCACGTCCAATTGCTTGCCGTATATTTGCAAACAAGgtac---ttttatgtg-gtaatggcctcttttttcaaacgagtagcatcataaatatgtgtgaaatgtcaaaaagt-ctgagttgaacgacatgaccatgcaata