1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ATTACAAACTGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatttatgctaatacttttttgtgattcacatgtatcactatcactttctgcactaattttcttccaaaaaagattgacagttgctactgttgttgctgacatgattttctctttttag
species | Zea mays |
transcript | GRMZM2G099328_T04 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|211535560|gb|FL475981.1|FL475981
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTCCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|32859029|gb|CD998710.1|CD998710
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|44900705|gb|CK827250.1|CK827250
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|71773668|gb|DR971565.1|DR971565
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTTGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTTTATEST: gi|76910058|gb|DV163680.1|DV163680
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTATEST: gi|31362847|gb|CD447204.1|CD447204
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
EST: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAG GATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
genomic: TGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatt ... ctctttttagGATTCCGAAACCTTAGTATTGAGGTTGAAGAAGGCATCTGCCAAGTTCTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATTACAAACTGGTTCCATTCTTGCCCATGAGATGATGCATGCATATCTTCGTCTCAAAGgtaatttatttatgctaatacttttttgtgattcacatgtatcactatcactttctgcactaattttcttccaaaaaagattgacagttgctactgttgttgctgacatgattttctctttttag
- - - - - - - - - - - - - - GAGATG