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GCCTCGGTAAAAATTGATATTGGTTTTGCAAAGGAGGCCCCTATTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatcttttcccacctgccagcaaacatctggttacttctccccattctaccacaaagatagacttagtgcccatttgttttataattatttgaaat...
species | Zea mays |
transcript | GRMZM2G021864_T01 |
intron # | 12 |
splice site | 5' |
intron type | U2 |
EST: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|211404582|gb|FL228991.1|FL228991
genomic: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|5361116|gb|AI795731.1|AI795731
genomic: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: GACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|9794197|gb|BE552505.1|BE552505
genomic: GACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: CACAAAGATCGACTTATAATG CCTTTCTGTAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|211404583|gb|FL228992.1|FL228992
genomic: CACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|78106768|gb|DV525186.1|DV525186
genomic: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTTEST: gi|91054831|gb|EB165249.1|EB165249
genomic: TTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
EST: TTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATG CCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
genomic: TTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatctt ... ctctttatagCCTTTCTGGAAGGTCCTTCAAGAAGGATCTAGCAGAGGGAGAAGTGTGGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCCTCGGTAAAAATTGATATTGGTTTTGCAAAGGAGGCCCCTATTTTGGGCATTTTTGGGATGAATGTCTACCACAAAGATCGACTTATAATGgtaacatcttttcccacctgccagcaaacatctggttacttctccccattctaccacaaagatagacttagtgcccatttgttttataattatttgaaat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagatag