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AGGAAGATGGGTCATATTACAATTGTGGGGCCTTCTAAGATAAGTGTAAAATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattcactattaaatattatcagaatttgtttggatcaatgcccatgcttgcagcaaatcttttggtcgctctgaatcgtatataacagttcatt...
species | Zea mays |
transcript | GRMZM2G133121_T02 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGAEST: gi|211118591|gb|FL071331.1|FL071331
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGAEST: gi|211118596|gb|FL071336.1|FL071336
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGAEST: gi|29167951|gb|CB411211.1|CB411211
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCC----AAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGAEST: gi|211118592|gb|FL071332.1|FL071332
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGAEST: gi|9566322|gb|BE475831.1|BE475831
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
EST: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAG TTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
genomic: ATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattc ... tttgctgcagTTAGCCCTCGTGTTGCTATTATAATGGGGTCCCAATCTGATCTTCCTGTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGGAAGATGGGTCATATTACAATTGTGGGGCCTTCTAAGATAAGTGTAAAATCACGCTTGGACAACTTGCTGCAAAGAAACTCGTCTGATCCCAAGGAAGgtattgattcactattaaatattatcagaatttgtttggatcaatgcccatgcttgcagcaaatcttttggtcgctctgaatcgtatataacagttcatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA