1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GGAAGCTCTATGCAACGCGTGCGAGATAGTAGTGTTCTGGACGCAAAGCGAGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgagaggctatctcgactcgagccactggttcttccttcgtcttcgccagacatgtctaaccccagaagttgagttgcatccatcgacgtacgtatacag
species | Zea mays |
transcript | GRMZM2G130333_T01 |
intron # | 10 |
splice site | 5' |
intron type | U2 |
EST: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGCEST: gi|211475048|gb|FL213523.1|FL213523
genomic: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
EST: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGCEST: gi|110200388|gb|EC882285.1|EC882285
genomic: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
EST: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGCEST: gi|211089522|gb|FL476385.1|FL476385
genomic: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
EST: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGCEST: gi|50332328|gb|CO527454.1|CO527454
genomic: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
EST: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGCEST: gi|211345527|gb|FL476186.1|FL476186
genomic: AGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
EST: CGAACAGGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGG CTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
genomic: CGAACA-GGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgaga ... acgtatacagCTCTGCGAAAGCATGCCCGATCCGGTGGGGTCGCGCGTGGACTGCGGACGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAGCTCTATGCAACGCGTGCGAGATAGTAGTGTTCTGGACGCAAAGCGAGCTGAGCCCGAACAGGAGCAACGAGGGCACGCTGGAGTACGTGGACAGGgtgagtgagaggctatctcgactcgagccactggttcttccttcgtcttcgccagacatgtctaaccccagaagttgagttgcatccatcgacgtacgtatacag
- - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA