1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GCGCCGCCTCCTCCAGCGCGCTGAGGGCGACCAGCTACCATTCGAATTCCGGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatcaaaactcctcgattccatgtctgtgtctgaactacataaatgccctagtgcaaaaaacacaagaaacggtatcttggcgaaggaacgtctt...
species | Zea mays |
transcript | GRMZM2G170326_T02 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCCCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|78104709|gb|DV523127.1|DV523127
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|78076278|gb|DV504712.1|DV504712
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|32791005|gb|CD943241.1|CD943241
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|78089038|gb|DV517431.1|DV517431
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|5847172|gb|AW000251.1|AW000251
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|78076448|gb|DV504882.1|DV504882
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|91872270|gb|EB402227.1|EB402227
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|71307959|gb|DR790199.1|DR790199
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|91048956|gb|EB159374.1|EB159374
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|74233302|gb|DT641216.1|DT641216
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCCEST: gi|94479849|gb|EB708807.1|EB708807
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
EST: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAG GCAGCGAAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
genomic: GGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatca ... ttctcttcagGCAGCGGAACTGGAAATTGAAGCATATCCATTATTGGATGAGCTGACATCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCGCCGCCTCCTCCAGCGCGCTGAGGGCGACCAGCTACCATTCGAATTCCGGGCGCTCGAGCTCGCCCTCGAGGCCGCATGCTCCTTCCTCGATGCACAGgtgatcatcaaaactcctcgattccatgtctgtgtctgaactacataaatgccctagtgcaaaaaacacaagaaacggtatcttggcgaaggaacgtctt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - caagaaac