1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
CCGCGCCGACAGGACCAAGCTCGTGCTCGCCTGCATGGTCGCCGCGGGCGTCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattggttaccgaccgcccctcagttttttttccagattcaggtatactaacgacgcctagattgaactgtcaagacagagggaagattcactatc...
species | Zea mays |
transcript | GRMZM2G145107_T03 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAG ACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCTEST: gi|93282781|gb|EB675045.1|EB675045
genomic: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
EST: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAG ACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCTEST: gi|93284115|gb|EB676379.1|EB676379
genomic: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
EST: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAG ACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCTEST: gi|19855127|gb|BQ060179.1|BQ060179
genomic: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
EST: GCTCTCCCTCCTCACGCCCTACGTCCAG ACCCTAGGAATAGACCATGCCATGGCACCATTTATTTGGCTGTGTGGGCCTEST: gi|78078077|gb|DV506492.1|DV506492
genomic: GCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
EST: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAG ACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCTEST: gi|149104737|gb|EE290188.2|EE290188
genomic: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
EST: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAG ACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
genomic: TCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattgg ... ttttgtgcagACCCTAGGAATAGACCATGCCATGGCATCATTTATTTGGCTGTGTGGGCCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCGCGCCGACAGGACCAAGCTCGTGCTCGCCTGCATGGTCGCCGCGGGCGTCCAGTTCGGATGGGCGCTGCAGCTCTCCCTCCTTACGCCATACATCCAGgtactattggttaccgaccgcccctcagttttttttccagattcaggtatactaacgacgcctagattgaactgtcaagacagagggaagattcactatc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC