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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCACCTTGTAGAATTACAAATGCTGTGAAGGAGTCTGGGGGGTTGAGAGAAAGGTTGTATCATACTGCATACAATGCCAAGCGACATGCAATGATAAATGgtaacagactacaactttgtggagtccatttacattcgcttacagtttgaacttgtcatttttattattgtacctcagcaaccaattaacatgatttttt...

Basic information

species Zea mays
transcript GRMZM2G059381_T03
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213179260|gb|FM184509.1|FM184509
EST:     ACTGCATACAATGCCAAGCGACATGCCATGATAAATG                         GTAGAAACCCATCACCTATGTGGGACAAGTTGGTATTTAACAAAATTAAAG
genomic: ACTGCATACAATGCCAAGCGACATGCAATGATAAATGgtaacagact ... ctgttgttagGTAGAAACCCATCACCTATGTGGGACAAGTTGGTATTTAACAAAATTAAAG
EST: gi|58030032|gb|CX725459.1|CX725459
EST:     AAGGCTGTATCATACTGCATACAATGCCAAGCGACATGCCATGATAAATG                         GTAGAAACCCATCACCTATGTGGGACAAGTTGGTATTTAACAAAATTAAAG
genomic: AAGGTTGTATCATACTGCATACAATGCCAAGCGACATGCAATGATAAATGgtaacagact ... ctgttgttagGTAGAAACCCATCACCTATGTGGGACAAGTTGGTATTTAACAAAATTAAAG