Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCGCCGGAGCCCAACACCTCCCCACCATGCCGCGAAACTTCCGCAAGCGGGGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctccctccaatcctctcctctctcttgctctgttgggccttcttgctgatacctgcctcgcttcctcccctttcag

Basic information

species Zea mays
transcript GRMZM2G015902_T01
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G015902_T01 (Zea mays), 5'ss of exon 1
lower sequence: LOC_Os03g25720.1 (Oryza sativa), 5'ss of exon 1
CCGCCGGAGCCCAACACCTCCCCACCATGCCGCGAAACTTCCGCAAGCGGGGCATCGAGCAGGACACTGAC---GACCGCTCCGACGACGAGGACACTCGCCGgtacccctccctccaatcctctcc------------tctctcttg---ctctgttgggccttcttgctgatacctgcctcgcttcctcccctttcag-----
   || |  || | | ||  || ||||||| |   |||||||||||||||  | |||||  |||| | | |   |||| |||||||||||| ||| | ||||||||||||||||  |   || ||||            |||| ||||    |  || |||   ||| |||||     ||||| || |||| ||   |       
--ACCAGT-CCAAGCTCCGTCCAACCATGCGGAAGAACTTCCGCAAGCGGAACCTCGAGGCGGACGCCGCCGCCGACCACTCCGACGACGACGACGCCCGCCGgtacccctcccctctccccgctcccgccgccgcgcctctcgcttgggttttggtagggatctctcgctgactgacgcctctctccctctccccccctcgcag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|91048276|gb|EB158694.1|EB158694
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469328|gb|FL299247.1|FL299247
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|76935876|gb|DV174501.1|DV174501
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466798|gb|FL299229.1|FL299229
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|149014683|gb|EE044352.2|EE044352
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471845|gb|FL299252.1|FL299252
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471857|gb|FL299264.1|FL299264
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469319|gb|FL299238.1|FL299238
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471854|gb|FL299261.1|FL299261
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|71332986|gb|DR803518.1|DR803518
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471847|gb|FL299254.1|FL299254
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|76018908|gb|DT946078.1|DT946078
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469324|gb|FL299243.1|FL299243
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACAACAAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466802|gb|FL299233.1|FL299233
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACRAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466794|gb|FL299225.1|FL299225
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469323|gb|FL299242.1|FL299242
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|78116755|gb|DV535142.1|DV535142
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469325|gb|FL299244.1|FL299244
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|91870478|gb|EB400898.1|EB400898
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|148960852|gb|EE011528.2|EE011528
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466796|gb|FL299227.1|FL299227
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469317|gb|FL299236.1|FL299236
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469326|gb|FL299245.1|FL299245
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|71446263|gb|DR827313.1|DR827313
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|71437898|gb|DR818948.1|DR818948
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466800|gb|FL299231.1|FL299231
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469331|gb|FL299250.1|FL299250
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466801|gb|FL299232.1|FL299232
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471851|gb|FL299258.1|FL299258
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|149098115|gb|EE184069.2|EE184069
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469322|gb|FL299241.1|FL299241
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471852|gb|FL299259.1|FL299259
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471848|gb|FL299255.1|FL299255
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATTGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211466803|gb|FL299234.1|FL299234
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469329|gb|FL299248.1|FL299248
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471856|gb|FL299263.1|FL299263
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471855|gb|FL299262.1|FL299262
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|71770078|gb|DR968015.1|DR968015
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469327|gb|FL299246.1|FL299246
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469321|gb|FL299240.1|FL299240
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|71323571|gb|DR798454.1|DR798454
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211471846|gb|FL299253.1|FL299253
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
EST: gi|211469318|gb|FL299237.1|FL299237
EST:     GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCG                         CATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT
genomic: GGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctcc ... cccctttcagCATCGCCCTCGAGGAGATCAAGTACATGCAGAAGCTCCGGGAGAGGAAGCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
CCGCCGGAGCCCAACACCTCCCCACCATGCCGCGAAACTTCCGCAAGCGGGGCATCGAGCAGGACACTGACGACCGCTCCGACGACGAGGACACTCGCCGgtacccctccctccaatcctctcctctctcttgctctgttgggccttcttgctgatacctgcctcgcttcctcccctttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG