1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' |
TGTTGTTAGTATGAAGTGTAAAGCTGATCGTGTTGATGGGGGTTATATTTTAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcattagtattgctttacttacttttgagtgcagctttgattactttatttttctcaagacatatacacacaatttaactctatcgtggaattg...
species | Vitis vinifera |
transcript | Vv06s0004g03140.t01 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCAEST: gi|352764155|gb|FQ467725.1|FQ467725
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCAEST: gi|22010794|gb|BQ795828.1|BQ795828
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCAEST: gi|352781928|gb|FQ469225.1|FQ469225
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCAEST: gi|352772398|gb|FQ469923.1|FQ469923
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAGGGAATTACAGCAEST: gi|110729869|gb|EE106297.1|EE106297
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTG GTTGTTTATGCGAAAACAGATATTACAGCTCATTCAAAAGGAATTACAGCAEST: gi|352778090|gb|FQ467143.1|FQ467143
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCATTCAAAAGGAATTACAGCA
EST: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCCATTGCTCAGACACTG GTTGTTTATGCCAAAACGGATATTACAGCTCA
genomic: TAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcat ... ctgggttcagGTTGTTTATGCGAAAACGGATATTACAGCTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTTGTTAGTATGAAGTGTAAAGCTGATCGTGTTGATGGGGGTTATATTTTAAATGGAAACAAGATGTGGTGCACCAATGGTCCAATTGCTCAGACACTGgtatcttcattagtattgctttacttacttttgagtgcagctttgattactttatttttctcaagacatatacacacaatttaactctatcgtggaattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagacata