1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGACTGCAGGCAGAGGCATAATCCACTCTGAAATGCCTGCAGATGAAGGAACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAATgtaaggatctctcaacacaaattccaatcacaattatgatgaaatctacagttttcttcaaaataattttggtgcatacctttatgttatgccactttgtgaagaattcacatttcctcaattcag
species | Vitis vinifera |
transcript | Vv05s0062g01190.t01 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAAT GATTGAACCAAATTACCAAGAATTGCCAAGTGAGGACATCAAAAGAGCAGAEST: gi|71880887|gb|DT029942.1|DT029942
genomic: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAATgtaaggatct ... ctcaattcagGATTGAACCAAATTACCAAGAATTGCCGAGTGAGGACATCAAAAGAGCAGA
EST: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAAT GATTGAACCAAATTACCAAGEST: gi|161718051|gb|FC067586.1|FC067586
genomic: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAATgtaaggatct ... ctcaattcagGATTGAACCAAATTACCAAG
EST: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAAT GATTGAACCAAATTACCAAGAATTGCCGAGTGAGGACATCAAAAGAGCAGA
genomic: ACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAATgtaaggatct ... ctcaattcagGATTGAACCAAATTACCAAGAATTGCCGAGTGAGGACATCAAAAGAGCAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGACTGCAGGCAGAGGCATAATCCACTCTGAAATGCCTGCAGATGAAGGAACCCAAAAGGGCTTGCAGCTTTGGATCAATCTAGCATCCAAAGACAAAATgtaaggatctctcaacacaaattccaatcacaattatgatgaaatctacagttttcttcaaaataattttggtgcatacctttatgttatgccactttgtgaagaattcacatttcctcaattcag
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