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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTGGTTGCCAATCCAGTGGAGCTATCTGGGAAGGGAAGACCCCGCGTTTTCTATGATGTTACATGCACTCTAAAAACATTAGGGATATGCATTTTCTCGgtaagaaacctcaaaatctgattttcttggtactttcattgtactagatgttaaattctcttcccttttttattgctttgtag

Basic information

species Vitis vinifera
transcript Vv13s0019g00740.t01
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: Vv13s0019g00740.t01 (Vitis vinifera), 5'ss of exon 5
lower sequence: GLYMA18G52600.1 (Glycine max), 5'ss of exon 5
CCTGGTTGCCAATCCAGTGGAGCTATCTGGGAAGGGAAGACCCCGCGTTTTCTATGATGTTACATGCACTCTAAAAACATTAGGGATATGCATTTTCTCGgtaag-------------aaacct-------caaaatctgattttcttggtactttcattgtactagatgttaaattctcttcccttttttattgctttgtag
 |||||||| ||||| ||||||||   ||| ||||| |||||||| || |||||||||||||| |  ||| ||||| | || ||  || ||||||||||||||||             || | |       |||  | |||| |||||   |      | |||  || |  | |||       | ||  || |||  ||||||
TCTGGTTGCTAATCCTGTGGAGCTGAGTGGAAAGGGGAGACCCCGTGTATTCTATGATGTTACGTTGACTTTAAAAGCGTTGGGAGTAGGCATTTTCTCGgtaagtttttatgttttaaagcttattgtgacaatgtttgatgttctttaaaggaatctagtaacagtttctgaataaaagctctttcattgttgtattgtag