1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GTCAAGTTAATGTGTTCCTATTGTAAGAAACATGATGAAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAAGGTTTTGAGAAGgtaatgtataatctgccatatgatttgcaatataggaagtaaggtgggagacagcacatttttgcgcatgtttgggatgaaataaaatatcatatcataa...
species | Vitis vinifera |
transcript | Vv06s0061g01530.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAGGGTTTTGAGAAG GTTCTGGATTTACTTGAAGATGCTTGTGAATCATTATTAGACAGCATTTTGEST: gi|33401488|gb|CF207115.1|CF207115
genomic: AAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAAGGTTTTGAGAAGgtaatgtata ... caaatggcagGTTCTGGATTTACTTGAAGATGCTTGTGAATCATTATTAGACAGCATTTTG
EST: AAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAAGGTTTTGAGAAG GTTCTGGATTTACTTGAAGATGCTTGTGAATCATTATTAGACAGCATTTTG
genomic: AAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAAGGTTTTGAGAAGgtaatgtata ... caaatggcagGTTCTGGATTTACTTGAAGATGCTTGTGAATCATTATTAGACAGCATTTTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCAAGTTAATGTGTTCCTATTGTAAGAAACATGATGAAACTGAAGTCCCAGATCCTTACTACGGGGGACCGCAAGGTTTTGAGAAGgtaatgtataatctgccatatgatttgcaatataggaagtaaggtgggagacagcacatttttgcgcatgtttgggatgaaataaaatatcatatcataa
- - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaagtaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gtgggag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaataaa