1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
ACAAGGAGTATTTCAGTGGGAGTTTGATTGAGACTAAAATGCTTAAGGAAGGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctggtttcaattcttatgcacaattatgaatctcttggatgtcctttgtttgcatcagcacatgataactctgtttacaaaattatcttgcata...
species | Vitis vinifera |
transcript | Vv06s0061g00700.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAG GACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGGEST: gi|18459374|gb|BM437652.1|BM437652
genomic: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctgg ... gaaatttcagGACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGG
EST: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAG GACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGGEST: gi|110365496|gb|EC928579.1|EC928579
genomic: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctgg ... gaaatttcagGACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGG
EST: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAG GACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGGEST: gi|110416128|gb|EC982086.1|EC982086
genomic: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctgg ... gaaatttcagGACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGG
EST: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAG GACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGGEST: gi|71868353|gb|DT017408.1|DT017408
genomic: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctgg ... gaaatttcagGACTTGTAAGCAATTAGATTCAGCTGAGGACAAGGGGGAGACAATGACCGG
EST: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAG GACTTGTAAGCAATTAG
genomic: GGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctgg ... gaaatttcagGACTTGTAAGCAATTAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACAAGGAGTATTTCAGTGGGAGTTTGATTGAGACTAAAATGCTTAAGGAAGGTGATGGATTCACTGGTTTGAAACGCTCTTCTTCCTACAATGCAGACAGgttagtctggtttcaattcttatgcacaattatgaatctcttggatgtcctttgtttgcatcagcacatgataactctgtttacaaaattatcttgcata
- - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaatta