1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
ACATGTGCCAATGTGGAAGGGTGTCAAGGTTTCATATACGATAATTGCATTGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttatctctttttaattatggtatgtttgtttgaaattagagtccgagctcttttaagaagttgaatacttcttttaccctaagataaaaagtca...
species | Vitis vinifera |
transcript | Vv03s0038g03530.t01 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAACAACATTGTTTCAATACCATGGCCATEST: gi|71858384|gb|DT007439.1|DT007439
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAGCGGCATTGTTTCAATACCATGGCCAGEST: gi|161712461|gb|FC061766.1|FC061766
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCAAGCGATGGGGGCGTGCTAACGGCATTGTTTCAATACCATGGCCAGEST: gi|161714507|gb|FC062957.1|FC062957
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAGCGGCATTGTTTCAATACCATGGCCAGEST: gi|33406115|gb|CF211742.1|CF211742
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAGCGGCATTGTTTCAATACCATGGCCAGEST: gi|71859535|gb|DT008590.1|DT008590
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAGCEST: gi|71856530|gb|DT005585.1|DT005585
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGC
EST: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTG ATACCGAGCGATGGGGGCGTGCTAGCGGCATTGTTTCAATACCATGGCCAG
genomic: TGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttat ... tcaatgacagATACCGAGCGATGGGGGCGTGCTAGCAGCATTGTTTCAATACCATGGCCAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACATGTGCCAATGTGGAAGGGTGTCAAGGTTTCATATACGATAATTGCATTGTGTCTCTATCCCCTAACCATTGGGGGCTATTGGACATATGGTCAATTGgtaggtttatctctttttaattatggtatgtttgtttgaaattagagtccgagctcttttaagaagttgaatacttcttttaccctaagataaaaagtca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ataaaaa