1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TATGGGTGTTTTTGCTGTTGATACGTTGGACTTGGCTGATATTGAATGGTCACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAGgtttccaaattgacacttctcattgtttgttgtgaatatgaaccataattttttttctttattgttgcaattgtggagttctcttaaagaagattttttt...
species | Vitis vinifera |
transcript | Vv16s0013g01510.t01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAA GTTCTTATCTACTCCCCAGATGGGAGGTGCCTATCTAAGTATCAAGCATATEST: gi|110700943|gb|EE078041.1|EE078041
genomic: CACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAGgtttccaaat ... tttggtacagGTTCTTATCTACTCCCCAGATGGGAGGTGCCTATCTAAGTATCAAGCATAT
EST: CACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAA GTTCTTATCTACTCCCCAGATGGGAGGTGCCTATCTAAGTATCAAGCATAT
genomic: CACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAGgtttccaaat ... tttggtacagGTTCTTATCTACTCCCCAGATGGGAGGTGCCTATCTAAGTATCAAGCATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGGGTGTTTTTGCTGTTGATACGTTGGACTTGGCTGATATTGAATGGTCACCAGATGATAGTGCTATTGTTATCTGGGATTCGCCTCTTGAATACAAGgtttccaaattgacacttctcattgtttgttgtgaatatgaaccataattttttttctttattgttgcaattgtggagttctcttaaagaagattttttt
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaattga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaccataa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagaag