1 5' 3' | 2 5' 3' | 3 5' 3' |
AAAACTTCAATAACCCCCAAGGCGGCCCGGGGTCCGGAACCAACCAATCCCAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGATTACAGgtacaggtacaatcccaattcatgtgatcttgtctgatatcctattctgcattgttgtatcctttatggttattgctctgtgaaatgaatcccaataggc...
species | Vitis vinifera |
transcript | Vv16s0039g01450.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGATTACAG GTATCTTCATGGACTTAAACCCGAGGTAGGCGAACATAGTTTCTTCTCTGAEST: gi|110690384|gb|EE067434.1|EE067434
genomic: CAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGATTACAGgtacaggtac ... agacatgcagGTATCTTCATGGACTTAAACCCGAGGTAGGCGAACATAGTTTCTTCTCTGA
EST: CAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGATTACAGGTACAG
genomic: CAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGA-T-----TACAGgtacaggtac ... agaca
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAACTTCAATAACCCCCAAGGCGGCCCGGGGTCCGGAACCAACCAATCCCAATTCCATATGGAGCCCATTCCCTATGGCATTCCTAATAAAGATTACAGgtacaggtacaatcccaattcatgtgatcttgtctgatatcctattctgcattgttgtatcctttatggttattgctctgtgaaatgaatcccaataggc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgtgaaa