Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|161707383|gb|FC056880.1|FC056880EST: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCG CAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
genomic: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCGgtgagttgct ... atatatgcagCAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
EST:
gi|161720580|gb|FC069908.1|FC069908EST: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCG CAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
genomic: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCGgtgagttgct ... atatatgcagCAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
EST:
gi|71871534|gb|DT020589.1|DT020589EST: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCG CAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
genomic: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCGgtgagttgct ... atatatgcagCAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
EST:
gi|161720795|gb|FC070303.1|FC070303EST: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCG CAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
genomic: CGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCGgtgagttgct ... atatatgcagCAAAACAATGGATGAGTACATTGCTCAACTGTTCAAGCTGGCAGAGAAGCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
AAGAAACTGCATCTAATATAGACTGGGAAAGCAGCTTTTTCCTTTGGCATCGACCAACTTCTAACATTGATGAGTTTACAAACATCTCAGAGGATCTTCGgtgagttgctatttcaacgagaaaccaggatggatcaacacatgtagtataccatacaaacttgctaatcaataaaatactggaatttcaacttttgatttacagaatgaaaacttttgtgtctatacttgtatattgacaaatgaataatgcatatatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAT