1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGATAAGATTCGGAGACCACTGCTGCGTACCAGATCCAATGATCCAGAAAAAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCGgtaactgcaaacctttcggcttctgaattatgagattttcttcttttttttaatgttttttcagaaatctcgtgctgggtttttaattattattgtacca...
species | Vitis vinifera |
transcript | Vv01s0011g01620.t01 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CTCCAAGTACCG ATTGATGTGCTTGAGGTTGATGGAGCTTACTATGEST: gi|110426960|gb|EC993389.1|EC993389
genomic: CTCCAAGTACCGgtaactgcaa ... agaactgcagATTGATGTGCTTGAGGTTGATGGAGCTTACTATG
EST: AAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCG ATTGATGTGCTTGAGGTTGATGGAGCTTACTATGEST: gi|32458122|gb|CD799296.1|CD799296
genomic: AAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCGgtaactgcaa ... agaactgcagATTGATGTGCTTGAGGTTGATGGAGCTTACTATG
EST: AAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCG ATTGATGTGCTTGAGGTTGATGGAGCTTACTATG
genomic: AAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCGgtaactgcaa ... agaactgcagATTGATGTGCTTGAGGTTGATGGAGCTTACTATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGATAAGATTCGGAGACCACTGCTGCGTACCAGATCCAATGATCCAGAAAAAGTGAAGGAACTCATGGAAAGTATCAGAGAAATTGGCCTCCAAGTACCGgtaactgcaaacctttcggcttctgaattatgagattttcttcttttttttaatgttttttcagaaatctcgtgctgggtttttaattattattgtacca
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcagaaa