1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CTCCTCGAATGGCGATTTCAGACGATTAACAGAGCCTAACATCCTCTCTTAAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAGgtaccatcgcgaaatctctttctccttctcctgattcatcgttttgcacacctgcattgctccgaatctcctcgccttccgattttctattgttttcacg...
species | Vitis vinifera |
transcript | Vv06s0061g00280.t01 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: AAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAG GTATGGCGGAGGTAGCCAAACTGACGTATATAGCGGTGCTGGACGAAAGAGEST: gi|161720099|gb|FC065463.1|FC065463
genomic: AAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAGgtaccatcgc ... ggttctgtagGTATGGCGGAGGTAGCCAAACTGACGTATATAGCGGTGCTGGACGAAAGAG
EST: AAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAG GTATGGCGGAGGTAGCCAAACTGACGTATATAGCGGTGCTGGACGAAAGAG
genomic: AAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAGgtaccatcgc ... ggttctgtagGTATGGCGGAGGTAGCCAAACTGACGTATATAGCGGTGCTGGACGAAAGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCTCGAATGGCGATTTCAGACGATTAACAGAGCCTAACATCCTCTCTTAAGACTCTGTGGTGTGGTGCGCACTCGGTTCCAATCAATTTGGCCTTCAGgtaccatcgcgaaatctctttctccttctcctgattcatcgttttgcacacctgcattgctccgaatctcctcgccttccgattttctattgttttcacg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ctccttc