1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TAGAACGCGAGTCCAGTTTTACGACTACCTGGATCTTCCTCAAGCATGCTACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcggagcttttcttcttggaaggcatggttttcttatactgtgttcttaaaag
species | Selaginella moellendorffii |
transcript | EFJ29865 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: ACTATATATCCGAGATCTTGGATTGTGTAGACGGGAAGCCATTGTTTAAG GTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGACEST: gi|169032758|gb|FE438292.1|FE438292
genomic: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcg ... ttcttaaaagGTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGAC
EST: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAG GTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGACEST: gi|169032757|gb|FE438291.1|FE438291
genomic: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcg ... ttcttaaaagGTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGAC
EST: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAG GTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGACEST: gi|169108202|gb|FE512575.1|FE512575
genomic: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcg ... ttcttaaaagGTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGAC
EST: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAG GTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGAC
genomic: ACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcg ... ttcttaaaagGTGTCTATGGAGGGCCGGCCTCACGAGAAGATCGTGTGCTCCAGCATCGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAGAACGCGAGTCCAGTTTTACGACTACCTGGATCTTCCTCAAGCATGCTACTATATGTCCGAGATCTTGGATTGTGCAGACGGGAAGCCATTGTTTAAGgtactttgcggagcttttcttcttggaaggcatggttttcttatactgtgttcttaaaag
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