1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
ACTGCTGGGATTCAAGAATCCTCAAGAAGTCTTGAGCCTTCAGGATAATGCCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAGgtactctgtttcactcgccaggaccactcagattgatgctcggcttgttgcag
species | Selaginella moellendorffii |
transcript | EFJ06431 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: CCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAG GAGATTGGAAGCCTGACTTTTGACAAGGACGATCAGTTGGCAATGGAGTTCEST: gi|169063591|gb|FE472009.1|FE472009
genomic: CCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAGgtactctgtt ... cttgttgcagGAGATTGGAAGCCTGACTTTTGACAAGGACGATCAGTTGGCAATGGAGTTC
EST: CCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAG GAGATTGGAAGCCTGACTTTTGACAAGGACGATCAGTTGGCAATGGAGTTC
genomic: CCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAGgtactctgtt ... cttgttgcagGAGATTGGAAGCCTGACTTTTGACAAGGACGATCAGTTGGCAATGGAGTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACTGCTGGGATTCAAGAATCCTCAAGAAGTCTTGAGCCTTCAGGATAATGCCAGGCTTTTCATTTCTGCTATGCGTGCAATCCTGGAGACGAGAACGAAGgtactctgtttcactcgccaggaccactcagattgatgctcggcttgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA