1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CCCTGGATCTCCAGTCGGGGTGTCTCTCAAAGGTGGTGCTGCCCCAGCTCCAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGACTCCGgtcgctgcagcggtaaaaatctcttttctttttttttgccttgaagctgacttgattcactcaatag
species | Selaginella moellendorffii |
transcript | EFJ07795 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGACTCCGGTCGCTGCAGCGEST: gi|169057097|gb|FE464660.1|FE464660
genomic: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGA---------CT-C--CGgtcgctgcag ...
EST: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGACTCCGGTCGCTGCAGCGEST: gi|169063988|gb|FE472799.1|FE472799
genomic: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGA---------CT-C--CGgtcgctgcag ...
EST: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGACTCCGGTCGCTGCAGCG
genomic: CAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGA---------CT-C--CGgtcgctgcag ...
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCCTGGATCTCCAGTCGGGGTGTCTCTCAAAGGTGGTGCTGCCCCAGCTCCAGCAGCTCCAGCTACGCGCGACGTACCTCCACCAGCGCCACAGACTCCGgtcgctgcagcggtaaaaatctcttttctttttttttgccttgaagctgacttgattcactcaatag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC