1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GTACGAGACAATGCGATATTGTTGAACCTCGGTAGCTTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAAgtaagaaagaaagtgatcgtcttgcttgtggtgatttgctcacactgctgcag
species | Selaginella moellendorffii |
transcript | EFJ07772 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CGACCACAAGAA CATTGGTGCACAGCTGTTCCTGGAGACCATCGTTCAGCGACTTAACGTAGAEST: gi|169034439|gb|FE446397.1|FE446397
genomic: CGACCACAAGAAgtaagaaaga ... actgctgcagCATTGGTGCACAGCTGTTCTTGGAGACCATCGTTCAGCGACTTAACGTAGA
EST: TTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAA CATTGGTGCACAGCTGTTCCTGGAGACCATCGTTCAGCGACTTAACGTAGAEST: gi|169036360|gb|FE445218.1|FE445218
genomic: TTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAAgtaagaaaga ... actgctgcagCATTGGTGCACAGCTGTTCTTGGAGACCATCGTTCAGCGACTTAACGTAGA
EST: TTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAA CATTGGTGCACAGCTGTTCCTGGAGACCATCGTTCAGCGACTTAACGTAGA
genomic: TTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAAgtaagaaaga ... actgctgcagCATTGGTGCACAGCTGTTCTTGGAGACCATCGTTCAGCGACTTAACGTAGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTACGAGACAATGCGATATTGTTGAACCTCGGTAGCTTGAGAGCAATTGCTACTCCCGAAAGTGTTCTTCTCTTCGACCACAAGAAgtaagaaagaaagtgatcgtcttgcttgtggtgatttgctcacactgctgcag
- - - - - - - - - - - - - - - - - - - AGAGCA