1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' | 17 5' 3' | 18 5' 3' |
ATGTCTTCCTGGACGTTCCGGACACCATCGATATCAGTCATATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaagctcttaactttggctctattttctaattatcttgtacag
species | Selaginella moellendorffii |
transcript | EFJ20925 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAG ATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGAEST: gi|169064576|gb|FE471307.1|FE471307
genomic: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaag ... tcttgtacagATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
EST: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAG ATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGAEST: gi|169043576|gb|FE450798.1|FE450798
genomic: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaag ... tcttgtacagATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
EST: TATGCGTGGCAAGGGACTCCANCCCGGCGAGGAGTTGCTTCCTGAAGCAG ATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGAEST: gi|169082079|gb|FE486977.1|FE486977
genomic: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaag ... tcttgtacagATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
EST: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAG ATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGAEST: gi|169019836|gb|FE426923.1|FE426923
genomic: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaag ... tcttgtacagATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
EST: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAG ATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
genomic: TATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaag ... tcttgtacagATGATGAAGCCGAGGGACCTGTAGCTGACGAGGCTATAGTCTCGCAACTGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTCTTCCTGGACGTTCCGGACACCATCGATATCAGTCATATGCGTGGCAAGGGACTCCAACCCGGCGAGGAGTTGCTTCCTGAAGCAGgttttcgaagctcttaactttggctctattttctaattatcttgtacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGC