1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
GTGAGAGTTTCGGGACATGGAGGATGGTTTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaagaaattttaaaacaggcactgaaagtttggatgagtccag
species | Selaginella moellendorffii |
transcript | EFJ15375 |
intron # | 15 |
splice site | 5' |
intron type | U2 |
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169097016|gb|FE497601.1|FE497601
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGACGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169074926|gb|FE482781.1|FE482781
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGACGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169020256|gb|FE430333.1|FE430333
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGACGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169026291|gb|FE432654.1|FE432654
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGACGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169055218|gb|FE462418.1|FE462418
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTGEST: gi|169094539|gb|FE494504.1|FE494504
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
EST: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAG GCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
genomic: TTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaa ... atgagtccagGCTCCCACGAAAGATGCTGCGCAAAAGCTGGGATCGTTTGTCATGGAAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGAGAGTTTCGGGACATGGAGGATGGTTTTTACTGAGGCTGTCTTTGCACGACCCTGTGCTGCCACTGAACATCGAGgtgagtgaaagaaattttaaaacaggcactgaaagtttggatgagtccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC