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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TATCATCGACCATCCCCTCATTATGAGTCCGCTAGCGAAGCAACACAGGTCCAAGCCAGGTCTCACAGAACGCTTTGAGCTCTTCGTAAACAAGCATGAGgtgagttgagtagtagcgcaggaaagaaactagagtgacgctcttttctctttcgcag

Basic information

species Selaginella moellendorffii
transcript EFJ06461
intron # 10
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169063625|gb|FE471731.1|FE471731
EST:     CCAAGCCAGGTCTCACAGAACGCTTTGAGCTCTTCGTAAACAAGCATGAG                         CTGGTGAATGCGTACACAGAGTTAAACAACCCCGTGGAACAGAGAGATCGA
genomic: CCAAGCCAGGTCTCACAGAACGCTTTGAGCTCTTCGTAAACAAGCATGAGgtgagttgag ... tctttcgcagCTGGTGAATGCGTACACAGAGTTAAACAACCCCGTGGAACAGAGAGATCGA
EST: gi|169081488|gb|FE487749.1|FE487749
EST:     CCAAGCCAGGTCTCACAGAACGCTTTGAGCTCTTCGTAAACAAGCATGAG                         CTGGTGAATGCGTACACAGAGTTAAACAACCCCGTGGAACAGAGAGATCGA
genomic: CCAAGCCAGGTCTCACAGAACGCTTTGAGCTCTTCGTAAACAAGCATGAGgtgagttgag ... tctttcgcagCTGGTGAATGCGTACACAGAGTTAAACAACCCCGTGGAACAGAGAGATCGA