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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CAACGCCCAACTGCCCGCCAAGGAGTGCATTCTCCCGCTCCTCTCCAAGGTCCTGGGCTACTGCATCATCCTTGCTTCCACGATCGTCAAGGTTCCACAGgtagcgtatgaactaaaatccatctcttcgattcgagctagctcgattgcattgactatccgttggattggaactcctcag

Basic information

species Selaginella moellendorffii
transcript EFJ06473
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|169080882|gb|FE488677.1|FE488677
EST:     TCCTGGGCTACTGCATCATCCTTGCTTCCACGATCGTCAAGGTTCCACAG                         ATTCACGTGATTATGAAGAACAAGAGCATCCAGGGGCTGAGCATTCCATCC
genomic: TCCTGGGCTACTGCATCATCCTTGCTTCCACGATCGTCAAGGTTCCACAGgtagcgtatg ... aactcctcagATTCACGTGATTATGAAGAACAAGAGCATCCAGGGGCTGAGCATTCCATCC
EST: gi|169042060|gb|FE447174.1|FE447174
EST:     TCCTGGGCTACTGCATCATCCTTGCTTCCACGATCGTCAAGGTTCCACAG                         ATTCACGTGATTATGAAGAACAAGAGCATCCAGGGGCTGAGCATTCCATCC
genomic: TCCTGGGCTACTGCATCATCCTTGCTTCCACGATCGTCAAGGTTCCACAGgtagcgtatg ... aactcctcagATTCACGTGATTATGAAGAACAAGAGCATCCAGGGGCTGAGCATTCCATCC