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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAGTCATGGGAACCCGTCAGCAAATCGAAACTCGTAATCCATTAGCATTTGCTCCCAAAATTGTACAGACATCTGATAACACACCGACGGAAGGGGTTGgtatctggttttcgccctcgcgacatgccatgactaacag

Basic information

species Selaginella moellendorffii
transcript EFJ04883
intron # 1
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: EFJ04883 (Selaginella moellendorffii), 5'ss of exon 1
lower sequence: Vv05s0020g03880.t01 (Vitis vinifera), 5'ss of exon 7
----ACAGTCATGGGAACCCGTCAGCAAATCGAAACTCGTAATCCATTAGCATTTGCTCCCAAAATTGTACAGACATCTGATAACACACCGACGGAAGGGGTTGgtatctggttttcgccctcgcgacatgccatgactaacag--------------------------------------
    || ||  | | ||| ||  |||| |||||| |||| |||||| ||||||||||||||||| |  |   ||  ||||||      |||   |  |||||| | |  |  || | ||| |      || |    | |   |                                       
AGATACTGTTCTTGCAACTCGCAAGCAGATCGAATCTCGGAATCCACTAGCATTTGCTCCCAAAGTGATTAGGAGCTCTGATTCTTTGCCGGAAGTTGGGgttaggacataattcttgccttgtgtttatacagaaaatctgaactgctagttaccctgttaagtgaggttttctcttgcag