1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GACGCTGACTTCCAGCCTGAGCCGGAGTTTCTTCAACGCACGGTGCCTTTCCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTGgtacgctgcaccttctcaccctttgaattctagctgtcgctgatcactggtcactgtcatgttcgttgtttccgtgaacaacgcatgccacatacacttg...
species | Physcomitrella patens |
transcript | PP1S36_62V6.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTG TGAACGCAAATGAGTGCCTGATGACGAAEST: gi|208346388|gb|DC912795.1|DC912795
genomic: CCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTGgtacgctgca ... aaatgtgcagTGAACGCAAATGAGTGCCTGATGACGAA
EST: CCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTG TGAACGCAAATGAGTGCCTGATGACGAA
genomic: CCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTGgtacgctgca ... aaatgtgcagTGAACGCAAATGAGTGCCTGATGACGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACGCTGACTTCCAGCCTGAGCCGGAGTTTCTTCAACGCACGGTGCCTTTCCTCGTACACAACTCGAATCTCGCACTCGTTCAAGCCCGCTGGAAGTTTGgtacgctgcaccttctcaccctttgaattctagctgtcgctgatcactggtcactgtcatgttcgttgtttccgtgaacaacgcatgccacatacacttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG