1 5' 3' | 2 5' 3' | 3 5' 3' |
GCTGTTGAGCGAGAACGAGTCGACTGAGCTCGTGCATCTCTTCATCGTGGCGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGGgttcgtttcgagtctaccattcgtgtcgtctaagtacacatgccatttgatatttgacattgtaacagaaagcatttcgtgagtttttatcgcttctggg...
species | Physcomitrella patens |
transcript | PP1S9_211V6.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGG GGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAACEST: gi|18372391|gb|BJ203993.1|BJ203993
genomic: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGGgttcgtttcg ... aaatgtgcagGGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAAC
EST: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGG GGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAACEST: gi|67507605|gb|BJ940486.1|BJ940486
genomic: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGGgttcgtttcg ... aaatgtgcagGGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAAC
EST: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGG GGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAAC
genomic: CGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGGgttcgtttcg ... aaatgtgcagGGAAAATACCGCACCATCTTGTACTTATCAGTAATCTACTGCCTCGGCAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGTTGAGCGAGAACGAGTCGACTGAGCTCGTGCATCTCTTCATCGTGGCGTGTTATGCTACGCCAATCATTGGCGCATTTCTGAGCGACTGCGTTTGGgttcgtttcgagtctaccattcgtgtcgtctaagtacacatgccatttgatatttgacattgtaacagaaagcatttcgtgagtttttatcgcttctggg
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