1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' |
ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactgctgattgtcgtaaacttagtcagaattcttgttgctatcctgagatatttattcagttgtgtacagtacagttgtttgcatctaccaaactgccactgtacacacagaaaactgtcataattctagccattgatcctgttatcatcctcaaagagtgaacagtttttttcttgttgcag
species | Oryza sativa |
transcript | LOC_Os05g03480.4 |
intron # | 9 |
splice site | 5' |
intron type | U2 |
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29665694|gb|CB661969.1|CB661969
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: GAGAATTGTTTTGTGCCCCCATGAAA-CGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTEST: gi|29680250|gb|CB676525.1|CB676525
genomic: GAGAATTGTTTTGTGCCCC-ATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29661037|gb|CB657312.1|CB657312
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAA-G GTGTTTATGTCATGATEST: gi|29637530|gb|CB642539.1|CB642539
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGAT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTEST: gi|29672430|gb|CB668705.1|CB668705
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29668356|gb|CB664631.1|CB664631
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29674357|gb|CB670632.1|CB670632
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29661039|gb|CB657314.1|CB657314
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: GAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAAGA-GGGAAAG GTGTTTATGTCATGATGTEST: gi|29669233|gb|CB665508.1|CB665508
genomic: GAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAA-GAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: CGAGAATTGTTTTGTGCCCCATGANAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTTGTGT-AGCTEST: gi|86823798|gb|CI258824.1|CI258824
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTT-GTGTTAGCT
EST: CGAGAATTGTTTTGTGCCCCAGGAGAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29644599|gb|CB649606.1|CB649606
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29662792|gb|CB659067.1|CB659067
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29643546|gb|CB648553.1|CB648553
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CAAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29663209|gb|CB659484.1|CB659484
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29637531|gb|CB642540.1|CB642540
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29673823|gb|CB670098.1|CB670098
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|87026900|gb|CI259553.1|CI259553
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: AGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664640|gb|CB660915.1|CB660915
genomic: AGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29663217|gb|CB659492.1|CB659492
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|58595349|gb|CF993657.1|CF993657
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTCTTAGCTGEST: gi|29657681|gb|CB653956.1|CB653956
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29669234|gb|CB665509.1|CB665509
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29659705|gb|CB655980.1|CB655980
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTEST: gi|29674434|gb|CB670709.1|CB670709
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: GTTTTGTGCCCCATGAAAACGTTATCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29670747|gb|CB667022.1|CB667022
genomic: GTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29672136|gb|CB668411.1|CB668411
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29674356|gb|CB670631.1|CB670631
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29675357|gb|CB671632.1|CB671632
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29683358|gb|CB679633.1|CB679633
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664111|gb|CB660386.1|CB660386
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664203|gb|CB660478.1|CB660478
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTEST: gi|29637681|gb|CB642690.1|CB642690
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: GGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTCGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29672648|gb|CB668923.1|CB668923
genomic: GGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29667481|gb|CB663756.1|CB663756
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|58594804|gb|CF993112.1|CF993112
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29642661|gb|CB647668.1|CB647668
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: GAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTEST: gi|29642659|gb|CB647666.1|CB647666
genomic: GAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAA-GGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29680932|gb|CB677207.1|CB677207
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664257|gb|CB660532.1|CB660532
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|33683926|gb|CF312165.1|CF312165
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|428577|gb|D24729.1|D24729
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|33683556|gb|CF311795.1|CF311795
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29665695|gb|CB661970.1|CB661970
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29661040|gb|CB657315.1|CB657315
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29679285|gb|CB675560.1|CB675560
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664204|gb|CB660479.1|CB660479
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29663798|gb|CB660073.1|CB660073
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29664256|gb|CB660531.1|CB660531
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: GAGAATTTGTTT-GTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTEST: gi|84117533|gb|CD151300.1|CD151300
genomic: GAGAATT-GTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29637680|gb|CB642689.1|CB642689
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29671621|gb|CB667896.1|CB667896
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|218479296|gb|FG957919.1|FG957919
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29678948|gb|CB675223.1|CB675223
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29669119|gb|CB665394.1|CB665394
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29661172|gb|CB657447.1|CB657447
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29680495|gb|CB676770.1|CB676770
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29658318|gb|CB654593.1|CB654593
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTGEST: gi|29680494|gb|CB676769.1|CB676769
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGANAG GTGTTTATGTCATGATGTEST: gi|29661171|gb|CB657446.1|CB657446
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATEST: gi|29661525|gb|CB657800.1|CB657800
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGAT
EST: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAG GTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
genomic: CGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactg ... cttgttgcagGTGTTTATGTCATGATGTCAGGGCTTGATCTAGAAAGACTTGTGTTAGCTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGTGAGCTTGTGTTCGAGAATTGTTTTGTGCCCCATGAAAACGTTCTCGGGGAAGAAGGGAAAGgtattaactgctgattgtcgtaaacttagtcagaattcttgttgctatcctgagatatttattcagttgtgtacagtacagttgtttgcatctaccaaactgccactgtacacacagaaaactgtcataattctagccattgatcctgttatcatcctcaaagagtgaacagtttttttcttgttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG