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TTGGCGTATATGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttatactgtttagaacagtacaaaacaatgtgtgtgggaaaataattttgtttttataatttgtgtgcactggtaataccaatggataccaacag...
species | Oryza sativa |
transcript | LOC_Os03g01750.5 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAG AGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCTEST: gi|2428616|gb|C73079.1|C73079
genomic: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttata ... tcttctgcagAGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
EST: GAAGGGCATCAGCTACTACAG AGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCTEST: gi|25806922|gb|CA762883.1|CA762883
genomic: GAAGGGCATCAGCTACTACAGgtatcttata ... tcttctgcagAGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
EST: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAG AGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCTEST: gi|55828006|gb|AU065392.2|AU065392
genomic: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttata ... tcttctgcagAGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
EST: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAG AGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCTEST: gi|428438|gb|D24587.1|D24587
genomic: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttata ... tcttctgcagAGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
EST: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAG AGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
genomic: TGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttata ... tcttctgcagAGTAAACGAGCTTGCTTTCCAAAGTTGGAAGCCATTAAATTGGCTACTGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTGGCGTATATGTTCTGGATTCTTGGCTACAGTCTTAATGAAGGGCATCAGCTACTACAGgtatcttatactgtttagaacagtacaaaacaatgtgtgtgggaaaataattttgtttttataatttgtgtgcactggtaataccaatggataccaacag
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