1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
CAAGCAGACCATCTTTATTGAGTACATCATGCTTGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaactttctgttctttctgcttcatttcatcctgattatcttattaatgattcttttaaatggttggaaaaccttcctgatcatctttgcggtat...
species | Oryza sativa |
transcript | LOC_Os03g10520.1 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCG GTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGEST: gi|25806287|gb|CA762248.1|CA762248
genomic: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaact ... tcactaacagGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
EST: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCG GTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGEST: gi|25806288|gb|CA762249.1|CA762249
genomic: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaact ... tcactaacagGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
EST: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCG GTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGEST: gi|29676199|gb|CB672474.1|CB672474
genomic: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaact ... tcactaacagGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
EST: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCG GTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAGEST: gi|86497171|gb|CI139804.1|CI139804
genomic: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaact ... tcactaacagGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
EST: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCG GTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
genomic: AGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaact ... tcactaacagGTTGTTAATCTGATACCATTCAATCCCATTGGCTCATCAAACAATTTCAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGCAGACCATCTTTATTGAGTACATCATGCTTGATGGAGTTAACGATCAGGAGCAGCATGCCCACCAGCTTGGTAAATTACTTGAAATGTTTAAAGCGgtaagaaactttctgttctttctgcttcatttcatcctgattatcttattaatgattcttttaaatggttggaaaaccttcctgatcatctttgcggtat
- - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGCAG