1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GAGGGCCGGACCCAGATCTTCAAGATCCACACTCGCACCATGAACTGCGAGCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccgggaattcttgcatgacagaatccagtctctggctagtttctgttccatgtcatttatctttaacctccttttttttttctcacgtttggctatttgtgtttgttggaacag
species | Oryza sativa |
transcript | LOC_Os06g09290.1 |
intron # | 6 |
splice site | 5' |
intron type | U2 |
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86431013|gb|CI083436.1|CI083436
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86535450|gb|CI175656.1|CI175656
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88510577|gb|CI438083.1|CI438083
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88476451|gb|CI413722.1|CI413722
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88264764|gb|CI368538.1|CI368538
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86545388|gb|CI185594.1|CI185594
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86414435|gb|CI068838.1|CI068838
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88319462|gb|CI518306.1|CI518306
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGAACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATNTACGCCATCCGCGEST: gi|88200394|gb|CI200244.1|CI200244
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88199676|gb|CI199526.1|CI199526
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88837952|gb|CI371530.1|CI371530
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GG-CCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACCCCATCCGCGEST: gi|88270642|gb|CI385900.1|CI385900
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GC-GGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88429584|gb|CI551649.1|CI551649
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88448181|gb|CI541767.1|CI541767
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: ACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88243651|gb|CI244048.1|CI244048
genomic: ACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86852767|gb|CI323076.1|CI323076
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|66929574|gb|CX116422.1|CX116422
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86593839|gb|CI260068.1|CI260068
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89196514|gb|CI399100.1|CI399100
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: TCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTTTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|218494177|gb|FG955168.1|FG955168
genomic: TCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88841960|gb|CI081216.1|CI081216
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88520017|gb|CI447671.1|CI447671
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88845085|gb|CI084010.1|CI084010
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|33795295|gb|CF323519.1|CF323519
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|94362521|gb|CI052387.1|CI052387
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTGTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88409154|gb|CI556862.1|CI556862
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88323685|gb|CI558706.1|CI558706
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86491229|gb|CI133862.1|CI133862
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88840491|gb|CI079945.1|CI079945
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86874510|gb|CI316876.1|CI316876
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACCCCATCCGCGEST: gi|86429797|gb|CI082220.1|CI082220
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88245550|gb|CI245399.1|CI245399
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88466583|gb|CI532390.1|CI532390
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: TGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86534876|gb|CI175082.1|CI175082
genomic: TGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89175028|gb|CI041106.1|CI041106
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88238294|gb|CI238143.1|CI238143
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88248462|gb|CI248311.1|CI248311
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86878831|gb|CI314330.1|CI314330
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|218498848|gb|FG967665.1|FG967665
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGEST: gi|86260871|gb|CI066546.1|CI066546
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89174233|gb|CI042126.1|CI042126
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|218485830|gb|FG961562.1|FG961562
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88836350|gb|CI078247.1|CI078247
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|33658399|gb|CF281012.1|CF281012
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89189866|gb|CI049405.1|CI049405
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86425210|gb|CI070307.1|CI070307
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86867457|gb|CI337880.1|CI337880
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89172828|gb|CI022707.1|CI022707
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88439745|gb|CI541302.1|CI541302
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89188907|gb|CI048643.1|CI048643
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86889209|gb|CI315820.1|CI315820
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89187220|gb|CI047287.1|CI047287
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86544859|gb|CI185065.1|CI185065
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88907113|gb|CI089907.1|CI089907
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCTATCCGCGEST: gi|3762395|gb|C99643.1|C99643
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88502029|gb|CI429535.1|CI429535
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86415446|gb|CI069849.1|CI069849
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|86250823|gb|CI007686.1|CI007686
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88383593|gb|CI543366.1|CI543366
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88295643|gb|CI530206.1|CI530206
genomic: GACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89175431|gb|CI042452.1|CI042452
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88374962|gb|CI521028.1|CI521028
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: CCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88969982|gb|CI383484.1|CI383484
genomic: CCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|89192450|gb|CI016459.1|CI016459
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|29646391|gb|CB651398.1|CB651398
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88282909|gb|CI402109.1|CI402109
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: TGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTNGCATGTACGCCATCCGCGEST: gi|88279031|gb|CI400031.1|CI400031
genomic: TGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCGEST: gi|88844652|gb|CI021227.1|CI021227
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
EST: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTG GGGCCGACGTACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
genomic: GCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccg ... gttggaacagGGGCCGACATACGGAGTGTGTGCACGGAGGCTGGCATGTACGCCATCCGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGGCCGGACCCAGATCTTCAAGATCCACACTCGCACCATGAACTGCGAGCGGGACATCCGGTTTGAGCTGCTCGCTCGCCTCTGCCCCAACTCCACTGgtaagtgccgggaattcttgcatgacagaatccagtctctggctagtttctgttccatgtcatttatctttaacctccttttttttttctcacgtttggctatttgtgtttgttggaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT