1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GACAAGGCTCCTTTCGTGACCAAGGCTGAGAAGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccctctccacaactctgcacctgcaactgtcatgacacattgaaactgatctgttgtgcgtttctcgttgcag
species | Oryza sativa |
transcript | LOC_Os09g37910.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTTTGACAAGTCCAAGTCCGAGGTGEST: gi|33664242|gb|CF295209.1|CF295209
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|55434605|gb|CV730425.1|CV730425
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33684508|gb|CF312747.1|CF312747
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86256064|gb|CI007780.1|CI007780
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33677032|gb|CF305271.1|CF305271
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86528526|gb|CI168732.1|CI168732
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACTACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86432557|gb|CI086168.1|CI086168
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33677015|gb|CF305254.1|CF305254
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|55436884|gb|CV731619.1|CV731619
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88845938|gb|CI084668.1|CI084668
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|55435979|gb|CV731127.1|CV731127
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: TACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|89176361|gb|CI043382.1|CI043382
genomic: TACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86860548|gb|CI323463.1|CI323463
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGAAGATTGACGCCTACAACAACAAGCAGG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTEST: gi|66947180|gb|AU312024.1|AU312024
genomic: AGAAGATTGACGCCTACAACAACAAGCA-Ggtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGT
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88237036|gb|CI236885.1|CI236885
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88214302|gb|CI214151.1|CI214151
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86527793|gb|CI167999.1|CI167999
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33664894|gb|CF295861.1|CF295861
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33655503|gb|CF278117.1|CF278117
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86254444|gb|CI059171.1|CI059171
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86522216|gb|CI162422.1|CI162422
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|109712974|gb|CI105582.1|CI105582
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88217879|gb|CI217728.1|CI217728
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: CAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|13896451|gb|AU182787.1|AU182787
genomic: CAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33655324|gb|CF277938.1|CF277938
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTEST: gi|88728459|gb|CI751969.1|CI751969
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTA-CCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGT
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCCCGTCCGAGGTGEST: gi|94362993|gb|CI053154.1|CI053154
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|89180836|gb|CI009744.1|CI009744
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCCAGTCCGAGGTGEST: gi|163926642|gb|EG713658.1|EG713658
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33653913|gb|CF276527.1|CF276527
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88986566|gb|CI033709.1|CI033709
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACGACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88962196|gb|CI097349.1|CI097349
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88204316|gb|CI204165.1|CI204165
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33657650|gb|CF280264.1|CF280264
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATT-ACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86488849|gb|CI131482.1|CI131482
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86507378|gb|CI150011.1|CI150011
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33659198|gb|CF281811.1|CF281811
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATT-ACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|89171274|gb|CI040551.1|CI040551
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88216560|gb|CI214660.1|CI214660
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86253064|gb|CI057989.1|CI057989
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86415474|gb|CI029485.1|CI029485
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88964072|gb|CI032989.1|CI032989
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88979426|gb|CI025928.1|CI025928
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: GGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88511789|gb|CI439295.1|CI439295
genomic: GGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: CTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33657164|gb|CF279778.1|CF279778
genomic: CTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCCTCAGGCGACTTTGACAAGTCCAAGTCCGAGGTEST: gi|13896450|gb|AU182786.1|AU182786
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTA-CCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGT
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86524796|gb|CI165002.1|CI165002
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|55434296|gb|CV730269.1|CV730269
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88986637|gb|CI033780.1|CI033780
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACTACAACAAGCAG GCAGGGGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86517396|gb|CI157602.1|CI157602
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|55439163|gb|CV732883.1|CV732883
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88205754|gb|CI205603.1|CI205603
genomic: AAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33659824|gb|CF282437.1|CF282437
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33680144|gb|CF308383.1|CF308383
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|88979044|gb|CI025558.1|CI025558
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|33656519|gb|CF279133.1|CF279133
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|32947912|gb|BP184484.1|BP184484
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86419590|gb|CI054391.1|CI054391
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTGEST: gi|86488236|gb|CI130869.1|CI130869
genomic: AGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
EST: CGCCTACAACAACAAGCAG GCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
genomic: CGCCTACAACAACAAGCAGgtaatccccc ... ctcgttgcagGCAGGAGGCCCGGCTACCTCAGGCGACTCTGACAAGTCCAAGTCCGAGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACAAGGCTCCTTTCGTGACCAAGGCTGAGAAGCTCAAGGCTGAGTACACCAAGAAGATTGACGCCTACAACAACAAGCAGgtaatccccctctccacaactctgcacctgcaactgtcatgacacattgaaactgatctgttgtgcgtttctcgttgcag
- - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG