1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GACCAAGGCATTTCAGTTCTCACTGATGCAATTAAAGCTTGCACAGCTGAGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttttgaatttttgttaattcgtttaggcttttgttatcttgtgtttgcacttttttacaaaaaaaaaaaaccagttcctatttgttattataatttcttcggttcattaagttttttctttgctaattttgcattttataaacag
species | Oryza sativa |
transcript | LOC_Os03g18510.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|89181133|gb|CI045216.1|CI045216
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88837938|gb|CI371516.1|CI371516
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGCTCAATGAGCACATAGAAACCCTTAACEST: gi|88221904|gb|CI221860.1|CI221860
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86859687|gb|CI345366.1|CI345366
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88200098|gb|CI199948.1|CI199948
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|87028029|gb|CI257189.1|CI257189
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88966659|gb|CI365882.1|CI365882
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|29615907|gb|CB620919.1|CB620919
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAATCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86254774|gb|CI061085.1|CI061085
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86495831|gb|CI138464.1|CI138464
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88506661|gb|CI434167.1|CI434167
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86418328|gb|CI032537.1|CI032537
genomic: AGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88254535|gb|CI353359.1|CI353359
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: TAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88908211|gb|CI090806.1|CI090806
genomic: TAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88846491|gb|CI373259.1|CI373259
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: TCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88216977|gb|CI216681.1|CI216681
genomic: TCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88835018|gb|CI370321.1|CI370321
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86498995|gb|CI141628.1|CI141628
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86865341|gb|CI330867.1|CI330867
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GATCGAGAAGCACAAGGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86538554|gb|CI178760.1|CI178760
genomic: GATCGAGAAGCACAA-GGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86888073|gb|CI297890.1|CI297890
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88273539|gb|CI393945.1|CI393945
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86490168|gb|CI132801.1|CI132801
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88450953|gb|CI531548.1|CI531548
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GCACCGAGAGCT NTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|22305547|gb|BQ906769.1|BQ906769
genomic: GCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAATCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGA-CT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88991140|gb|CI108527.1|CI108527
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88989126|gb|CI042239.1|CI042239
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88534658|gb|CI463399.1|CI463399
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGGATAAACTGTTCAATGAGCACATAGAAACCCTTAAEST: gi|86513048|gb|CI155681.1|CI155681
genomic: AGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAA-GATAAACTGTTCAATGAGCACATAGAAACCCTTAA
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|3767755|gb|AU031782.1|AU031782
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGNAGTGAGAGAGAAGATAAACTGTTCAATGGAGCACATAGAAACCCTTAEST: gi|88451110|gb|CI534103.1|CI534103
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTG-AGTGAGAGAGAAGATAAACTGTTCAATG-AGCACATAGAAACCCTTA
EST: AGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88202270|gb|CI202625.1|CI202625
genomic: AGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88983924|gb|CI250666.1|CI250666
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|4714850|gb|AU055967.1|AU055967
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88960582|gb|CI006543.1|CI006543
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCGCAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88852368|gb|CI374136.1|CI374136
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86537961|gb|CI178167.1|CI178167
genomic: GGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88488326|gb|CI425597.1|CI425597
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|89176760|gb|CI013333.1|CI013333
genomic: GAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88413263|gb|CI523824.1|CI523824
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: TAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88986674|gb|CI033817.1|CI033817
genomic: TAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|29615906|gb|CB620918.1|CB620918
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAATCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86502170|gb|CI144803.1|CI144803
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GATCGAGAAGCACCAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|3767754|gb|AU031781.1|AU031781
genomic: GATCGAGAAGCA-CAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: CGAGAAGCACAAGGGAAAAGTTGATANTTAAGGAAGCACCGAGAGCT NTGAGTGAGAGAGAAGATAAACTGTTCCAATGAGCCACATAGAAACCCTTAEST: gi|88831641|gb|CI369323.1|CI369323
genomic: CGAGAAGCACAAGGG-AAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTT-CAATGAG-CACATAGAAACCCTTA
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTCTTCAATGAGCACATAGAAACCCTTAACEST: gi|86413314|gb|CI067719.1|CI067719
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88969644|gb|CI383147.1|CI383147
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: TTGATAGTTAAGGAAGCACCGAGAGGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAEST: gi|88524987|gb|CI453604.1|CI453604
genomic: TTGATAGTTAAGGAAGCACCGAGA-GCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAA
EST: TTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86537698|gb|CI177904.1|CI177904
genomic: TTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|29615940|gb|CB620952.1|CB620952
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAATCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86412816|gb|CI067221.1|CI067221
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|87018064|gb|CI275878.1|CI275878
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|218497968|gb|FG969492.1|FG969492
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAATCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAEST: gi|88835157|gb|CI370460.1|CI370460
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTA
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|86834347|gb|CI344107.1|CI344107
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAACEST: gi|88366613|gb|CI556397.1|CI556397
genomic: AGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
EST: GAAGCACCGAGAGCT GTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
genomic: GAAGCACCGAGAGCTgtaagttttt ... ttataaacagGTGAGTGAGAGAGAAGATAAACTGTTCAATGAGCACATAGAAACCCTTAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GACCAAGGCATTTCAGTTCTCACTGATGCAATTAAAGCTTGCACAGCTGAGATCGAGAAGCACAAGGGAAAGTTGATAGTTAAGGAAGCACCGAGAGCTgtaagttttttgaatttttgttaattcgtttaggcttttgttatcttgtgtttgcacttttttacaaaaaaaaaaaaccagttcctatttgttattataatttcttcggttcattaagttttttctttgctaattttgcattttataaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT